2027 Short Courses (In-Person Only)





Short Courses

Wednesday, March 17, 2027 8:00 AM – 10:00 AM

SC1: Safety & Toxicity of Nucleic Acids

Nucleic acid therapeutics continue to expand beyond established antisense oligonucleotides and siRNAs to include increasingly complex modalities such as antibody-oligo conjugates, circular RNA, and gene editing therapies. Although these approaches share a nucleic acid component, their mechanisms of action, delivery strategies, chemical modifications, and potential safety liabilities can differ significantly. This short course will examine current nonclinical and regulatory considerations, common class effects, predictive toxicity assays, and ADME and PK/PD strategies to support the safe development of both established and next-generation nucleic acid therapeutics.

Topics to be discussed:

• Different types of nucleic acid-based drugs

• Mechanisms of actions and non-specific effects

• Current approaches to address non-specific effects and potential liabilities

• Findings secondary to class-effect of oligonucleotides

Aimed at both novice and advanced nucleic drug developers, the course will:

• Introduce and explain the differences between various types of nucleic acid drugs including antisense oligonucleotides, siRNAs, antibody-oligo conjugates, circular RNA and gene editing therapies

• Summarize our current understanding of the origins of non-specific effects and potential liabilities

• Provide direction on regulatory expectations and how to minimize the potential liabilities of nucleic acids drugs

• Provide an overview of DMPK considerations from a safety evaluation perspective

8:00 AM Welcome Remarks by Conference Director and Short Course Chair:
Sarah Lamore, PhD, Senior Director, Toxicology, Wave Life Sciences
8:05 AM Nonclinical Considerations for the Development of Oligonucleotide Therapeutics
Sarah Lamore, PhD, Senior Director, Toxicology, Wave Life Sciences

This presentation will review some of the common toxicities associated with oligonucleotide administration with a focus in antisense oligonucleotides (ASO) and siRNAs, discuss the regulatory expectations for the nonclinical safety evaluation of oligonucleotide therapeutics in the context of the applicable guidance documents, and present case studies highlighting some of the common class effects associated with siRNA and ASO administration.

8:30 AM Nonclinical Development of Next-Generation Oligonucleotide Therapies
Kristy Szretter, PhD, DABT, Scientific Director, Takeda Pharmaceutical

This presentation will review evolving regulatory and nonclinical considerations for oligonucleotide-based therapeutics, building on established approaches for antisense oligonucleotides and GalNAc-siRNAs. Using GalNAc-siRNA as a foundation, it will explore how common elements and modality-specific challenges influence the design of safety packages for more complex modalities, including antibody-oligo conjugates, circular RNA and gene editing therapies. Key considerations will include impact of delivery approaches, chemical modifications, on- and off-target effects, and long-term safety.

8:55 AM Networking Break
9:05 AM Application of in vitro Toxicity Assays in Preclinical Safety Assessment of Systemically and Intrathecally Administered Antisense Oligonucleotides (ASOs)
Fengjiao Zhang, PhD, DABT, Director, Toxicology, Preclinical & Clinical Discovery & Development Team, Wave Life Sciences

Preclinical safety assessment is a crucial phase of drug development and helps ensure patient safety by determining a safe starting clinical dose, screening out liability molecules, and by defining parameters for clinical monitoring. Preclinical safety assessment of ASOs include application of in vitro toxicity assays for throughput screening of potential toxicity, providing an early indication of hazardous properties prior to animal studies, and for understanding the mechanism of toxicity. Class effects that are observed following systemic or intrathecal administration of ASOs could include immune stimulation, complement system activation, clotting time prolongation, thrombocytopenia, and organ toxicities observed at supraclinical doses. Common histopathology findings include dose- and duration dependent infiltration of vacuolated macrophages and mononuclear inflammatory cells (could be non-dose-dependent) in multiple organs with systemic dosing, and predominantly in CNS with IT dosing. These effects are screened out and managed using efficiently designed in vitro and in vivo toxicity studies. We will discuss mechanisms of such effects along with the clinical relevance and use of predictive in vitro assays.

9:30 AM ADME and PK/PD Considerations for Preclinical Development of Antisense Oligonucleotides (ASOs)
Xiao Shelley Hu, PhD, President and Founder, Translational Consulting LLC

Olignonucleotides (ONs), including ASOs, siRNA and conjugated ONs  are an emerging class of medicines for unmet medical needs. The ADME and PK/PD entail specific considerations to support effective preclinical development. This talk will focus on factors relevant to preclinical development of these ONs.

9:55: Q and A
10:00: Close of Course

INSTRUCTOR BIOGRAPHIES:

Photo of Fengjiao Zhang, PhD, DABT, Director, Toxicology, Preclinical & Clinical Discovery & Development Team, Wave Life Sciences
Fengjiao Zhang, PhD, DABT, Director, Toxicology, Preclinical & Clinical Discovery & Development Team, Wave Life Sciences
Fengjiao is Director of Toxicology in the Preclinical & Clinical Discovery & Development Team at Wave Life Sciences. Prior to joining Wave, Fengjiao served as Principal Investigator (PI) and Professor in Shenyang Pharmaceutical University with extensive Drug Discovery & Development experience. She did her postdoctoral training at University of Arizona. She holds a PhD in Pharmacology and Toxicology and is a Diplomate of the American Board of Toxicology.
Photo of Kristy Szretter, PhD, DABT, Scientific Director, Takeda Pharmaceutical
Kristy Szretter, PhD, DABT, Scientific Director, Takeda Pharmaceutical
Kristy Szretter is a Scientific Director in the Nonclinical Safety and Pharmacology department at Takeda. Prior to joining Takeda, she served as a nonclinical lead at a number of organizations in the biotech industry. With over a decade of experience in nonclinical development, she has supported early and clinical development of biologics, cell therapies, vaccines, and viral and non-viral gene therapies in oncology, autoimmunity, infectious disease, neurology, and rare disease indications. She holds a PhD in Immunology and Molecular Pathogenesis from Emory University and is a Diplomat of the American Board of Toxicology.
Sarah Lamore, PhD, Senior Director, Toxicology, Wave Life Sciences
Sarah is Senior Director of Toxicology at Wave Life Sciences. Prior to joining Wave, Sarah was Senior Director of Toxicology at PepGen Inc. focusing on peptide-conjugated oligonucleotides and Toxicologist at Biogen where she worked on several modalities including small molecules and antisense oligonucleotides. She did her postdoctoral training at AstraZeneca and then joined the company as a Discovery Safety Scientist. She holds a PhD in Pharmacology and Toxicology from University of Arizona and is a Diplomate of the American Board of Toxicology.
Photo of Xiao Shelley Hu, PhD, President and Founder, Translational Consulting LLC
Xiao Shelley Hu, PhD, President and Founder, Translational Consulting LLC
Dr. Xiao Shelley Hu is a seasoned pharmaceutical scientist with over 20 years of experience driving innovation across multiple therapeutic areas. She earned her Ph.D. and M.S. in Pharmaceutics from The Ohio State University, an M.S. in Environmental Chemistry from the Chinese Academy of Sciences, and a B.S. in Pharmacy from Peking University. As the President and Founder of Translational Consulting LLC, Dr. Hu provides specialized expertise in DMPK, clinical pharmacology, pharmacometrics, and translational strategies to pharmaceutical and biotech companies. Her leadership experience includes serving as Vice President and Head of DMPK and Clinical Pharmacology at Wave Life Sciences, where she spearheaded regulatory filings and advanced global programs involving antisense oligonucleotides, siRNA, and A-to-I editors. Previously, at Akebia Therapeutics, she led Clinical Pharmacology and Bioanalytical Science Department, overseeing registrational studies leading to the approval for VAFSEO. During her tenure at Biogen, she played a pivotal role in the approval of PLEGRIDY and contributed to TECFIDERA world-wide approval. A published author and sought-after speaker, Dr. Hu is committed to leveraging her deep expertise to champion data-driven approaches and shape the future of personalized medicine.

SC2: Targeted Delivery in the Neuromuscular Space Using Oligonucleotide Conjugates

Targeted delivery has become an important strategy for expanding the potential of oligonucleotide therapeutics for neuromuscular conditions. This workshop will provide a practical overview of the opportunities and challenges in designing oligonucleotide conjugates, drawing on examples and learnings from programs across the field. The discussion will focus on how different design choices can be used to optimize exposure, pharmacology, and ultimately therapeutic activity.
Presentation to be Announced
Puneet Anand, PhD, Director, Oligonucleotide Chemistry, Neurocrine Biosciences Inc.

Topics to be discussed: 

  • Challenges and considerations for oligonucleotide delivery in neuromuscular conditions
  • Receptor selection and different targeting approaches, including antibody-, peptide-, and other oligonucleotide conjugates
  • Impact of antibody conjugation site and DAR (DAR1 versus DAR2) on tissue pharmacokinetic and pharmacodynamic properties
  • Oligonucleotide chemistry and linker design
  • Selection of dose, dosing regimen, and route of administration
  • Safety and durability of oligonucleotide conjugates​

INSTRUCTOR BIOGRAPHIES:

Photo of Jim Weterings, PhD, Vice President, Head of Oligonucleotide Therapeutics, Bonito Biosciences
Jim Weterings, PhD, Vice President, Head of Oligonucleotide Therapeutics, Bonito Biosciences
Puneet Anand, PhD, Director, Oligonucleotide Chemistry, Neurocrine Biosciences Inc.

Thursday, March 18, 2027 6:15 PM – 8:15 PM

SC3: Analytical Strategies for Regulatory Success and Process Control of Therapeutic Oligonucleotides

Analysis for the control of oligonucleotides can often be challenging, particularly developing and applying methods to control related impurities. Oligonucleotide manufacturing can produce many impurities which are so closely related to each other and to the full-length product. In many cases, a simple single chromatographic method is inadequate to characterise the impurity profile of a product, and good resolution is difficult to achieve. This course will discuss current and potential future approaches to solving some of these problems. It will consider methods, not only for lot release, but also for in-process control and the important area of process characterization. The discussions will focus on achieving regulatory success in the description and application of these approaches to support the overall product control strategy.
Instructors:
Mike Webb, PhD, Founder & CEO, MikeWebbPharma Ltd.
Chris Oswald, Founder, Owner, and Principal Consultant, Coswald Consulting LLC

INSTRUCTOR BIOGRAPHIES:

Photo of Chris Oswald, Founder, Owner, and Principal Consultant, Coswald Consulting LLC
Chris Oswald, Founder, Owner, and Principal Consultant, Coswald Consulting LLC
Chris is an independent consultant specializing in CMC related activities for drug substance and drug product. His experience spans from developing oligo related analytical methods in the laboratory, to managing a commercial QC laboratory, and then into being the manufacturing plant manager for Agilent Technologies in Boulder CO. These roles have provided him exposure to many CMC strategies that have been successfully utilized for clinical, pre-commercial, and commercial oligonucleotides in both the drug substance and drug product arenas. Chris also has a wide range of experience in facility buildouts, both new and appended, allowing exposure and understanding of the many unseen, as well as the very visible, parameters related to facility, equipment, process, and personnel that are necessary to align and control in order to ensure a successful and robust scaleup / technical transfer.
Photo of Mike Webb, PhD, Founder & CEO, MikeWebbPharma Ltd.
Mike Webb, PhD, Founder & CEO, MikeWebbPharma Ltd.
Mike received his PhD from imperial college in London. He spent most of his career at GSK and its legacy companies primarily as an analytical scientist and then becoming the Vice President of Development Chemistry and Analysis for GSK in the UK. He was heavily involved in establishing initial GSK’s oligonucleotide CMC development efforts. Mike has edited 3 books on the analysis of pharmaceuticals, including one on the analysis of oligonucleotides. Since leaving GSK in 2016, he has been consulting with Big Pharma and Biotechnology companies in the development, analysis and manufacture of therapeutic oligonucleotides from pre-clinical to marketing submission.

SC4: AI for Nucleic Acid Design

This course reviews the ecosystem of AI tools we have developed to accelerate therapeutic mRNA design: i) CodonBERT, which evaluates codon composition to forecast protein output, ii) mRNA-LM and Saluki, which analyze full-length transcripts to predict mRNA stability, iii) RiboNN, which predicts cellular translation efficiency among numerous cell types, and iv) an IVT yield model to predict synthesis efficiency from DNA sequence. Coupling these tools to generative AI will enable data-driven, end-to-end rational mRNA optimization. We use mRNA as an example nucleic acid but welcome a more general discussion of shared methodologies to oligo therapeutics and beyond.
Instructors:
Vikram Agarwal, PhD, Global Head of Platform Computational Design, Vaccines R&D, Sanofi
Dinghai Zheng, PhD, Principal Scientist, RNA-Machine Learning, Sanofi

INSTRUCTOR BIOGRAPHIES:

Dinghai Zheng, PhD, Principal Scientist, RNA-Machine Learning, Sanofi
Photo of Vikram Agarwal, PhD, Global Head of Platform Computational Design, Vaccines R&D, Sanofi
Vikram Agarwal, PhD, Global Head of Platform Computational Design, Vaccines R&D, Sanofi
Vikram Agarwal completed his Ph.D. in Dr. David Bartel's lab at the Massachusetts Institute of Technology, where he utilized computational approaches to study microRNA targeting. He completed his post-doctoral research in Dr. Jay Shendure's laboratory at the University of Washington, where he applied deep learning to study gene regulatory mechanisms. Vikram continued this lineage of work at Calico Life Sciences LLC, an Alphabet company. He is currently the Global Head of Platform Computational Design at the Vaccines R&D at Sanofi, where his team is applying AI/ML methods towards the design of enhanced mRNA and protein-based vaccines & therapeutics.

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Oligo Discovery & Clinical Development